IL_8CRE_440

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGAU*GCAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

8CRE|1|CM|G|1026
8CRE|1|CM|G|1027
8CRE|1|CM|A|1028
8CRE|1|CM|U|1029
*
8CRE|1|CM|G|1059
8CRE|1|CM|C|1060
8CRE|1|CM|A|1061
8CRE|1|CM|C|1062

Current chains

Chain CM

18S

Nearby chains

Chain CN

40S ribosomal protein S0

Chain CO

40S ribosomal protein S1

Chain DA

40S ribosomal protein S13

Chain DN

40S ribosomal protein S26