IL_8CRE_460

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GCU*AUAGUC

Length

9 nucleotides

Bulged bases

8CRE|1|CM|U|1356

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_07173.1

Basepair signature

cWW-L-R-L-cWW-L

Number of instances in this motif group

1

Unit IDs

8CRE|1|CM|G|1336
8CRE|1|CM|C|1337
8CRE|1|CM|U|1338
*
8CRE|1|CM|A|1355
8CRE|1|CM|U|1356
8CRE|1|CM|A|1357
8CRE|1|CM|G|1358
8CRE|1|CM|U|1359
8CRE|1|CM|C|1360

Current chains

Chain CM

18S

Nearby chains

Chain DD

40S ribosomal protein S16

Chain DG

40S ribosomal protein S19-A

Chain DH

Ribosomal protein S10