IL_8CRE_471

3D structure

PDB id

8CRE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Candida albicans 80S ribosome in complex with geneticin G418

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CGAU*AGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_09705.15

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

34

Unit IDs

8CRE|1|CM|C|1640
8CRE|1|CM|G|1641
8CRE|1|CM|A|1642
8CRE|1|CM|U|1643
*
8CRE|1|CM|A|1731
8CRE|1|CM|G|1732
8CRE|1|CM|A|1733
8CRE|1|CM|G|1734

Current chains

Chain CM

18S

Nearby chains

Chain AS

Large subunit ribosomal RNA; LSU rRNA

Chain CI

60S ribosomal protein L41