IL_8CSQ_017

3D structure

PDB id

8CSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial small subunit assembly intermediate (State B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

UUUUA*UGAACA

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CSQ|1|A|U|946
8CSQ|1|A|U|947
8CSQ|1|A|U|948
8CSQ|1|A|U|949
8CSQ|1|A|A|950
*
8CSQ|1|A|U|1044
8CSQ|1|A|G|1045
8CSQ|1|A|A|1046
8CSQ|1|A|A|1047
8CSQ|1|A|C|1048
8CSQ|1|A|A|1049

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain J

28S ribosomal protein S12, mitochondrial

Chain L

28S ribosomal protein S15, mitochondrial

Chain N

28S ribosomal protein S17, mitochondrial