IL_8CSQ_022

3D structure

PDB id

8CSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial small subunit assembly intermediate (State B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

AACACUACG*UAAAACU

Length

16 nucleotides

Bulged bases

8CSQ|1|A|C|1143

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CSQ|1|A|A|1139
8CSQ|1|A|A|1140
8CSQ|1|A|C|1141
8CSQ|1|A|A|1142
8CSQ|1|A|C|1143
8CSQ|1|A|U|1144
8CSQ|1|A|A|1145
8CSQ|1|A|C|1146
8CSQ|1|A|G|1147
*
8CSQ|1|A|U|1158
8CSQ|1|A|A|1159
8CSQ|1|A|A|1160
8CSQ|1|A|A|1161
8CSQ|1|A|A|1162
8CSQ|1|A|C|1163
8CSQ|1|A|U|1164

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 3

Aurora kinase A-interacting protein

Chain J

28S ribosomal protein S12, mitochondrial

Chain L

28S ribosomal protein S15, mitochondrial