IL_8CSQ_023

3D structure

PDB id

8CSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial small subunit assembly intermediate (State B)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

CAUAUC*GCCCUG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CSQ|1|A|C|1185
8CSQ|1|A|A|1186
8CSQ|1|A|U|1187
8CSQ|1|A|A|1188
8CSQ|1|A|U|1189
8CSQ|1|A|C|1190
*
8CSQ|1|A|G|1464
8CSQ|1|A|C|1465
8CSQ|1|A|C|1466
8CSQ|1|A|C|1467
8CSQ|1|A|U|1468
8CSQ|1|A|G|1469

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 7

Methyltransferase-like protein 17, mitochondrial

Chain F

28S ribosomal protein S7, mitochondrial

Chain a

GTPase Era, mitochondrial