IL_8CSS_014

3D structure

PDB id

8CSS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial small subunit assembly intermediate (State D)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.36 Å

Loop

Sequence

UGGUCAAUUU*AUUA

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CSS|1|A|U|876
8CSS|1|A|G|877
8CSS|1|A|G|878
8CSS|1|A|U|879
8CSS|1|A|C|880
8CSS|1|A|A|881
8CSS|1|A|A|882
8CSS|1|A|U|883
8CSS|1|A|U|884
8CSS|1|A|U|885
*
8CSS|1|A|A|910
8CSS|1|A|U|911
8CSS|1|A|U|912
8CSS|1|A|A|913

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain D

28S ribosomal protein S5, mitochondrial

Chain J

28S ribosomal protein S12, mitochondrial

Chain O

28S ribosomal protein S18b, mitochondrial