IL_8CSS_018

3D structure

PDB id

8CSS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial small subunit assembly intermediate (State D)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.36 Å

Loop

Sequence

UAAAACU*ACACAAA

Length

14 nucleotides

Bulged bases

8CSS|1|A|C|1011

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CSS|1|A|U|974
8CSS|1|A|A|975
8CSS|1|A|A|976
8CSS|1|A|A|977
8CSS|1|A|A|978
8CSS|1|A|C|979
8CSS|1|A|U|980
*
8CSS|1|A|A|1008
8CSS|1|A|C|1009
8CSS|1|A|A|1010
8CSS|1|A|C|1011
8CSS|1|A|A|1012
8CSS|1|A|A|1013
8CSS|1|A|A|1014

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain E

28S ribosomal protein S6, mitochondrial

Chain I

28S ribosomal protein S11, mitochondrial

Chain P

28S ribosomal protein S18c, mitochondrial

Chain Q

28S ribosomal protein S21, mitochondrial