IL_8CSS_029

3D structure

PDB id

8CSS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial small subunit assembly intermediate (State D)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.36 Å

Loop

Sequence

CUUGCUCAG*CCCAUG

Length

15 nucleotides

Bulged bases

8CSS|1|A|C|1250, 8CSS|1|A|U|1344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8CSS|1|A|C|1244
8CSS|1|A|U|1245
8CSS|1|A|U|1246
8CSS|1|A|G|1247
8CSS|1|A|C|1248
8CSS|1|A|U|1249
8CSS|1|A|C|1250
8CSS|1|A|A|1251
8CSS|1|A|G|1252
*
8CSS|1|A|C|1340
8CSS|1|A|C|1341
8CSS|1|A|C|1342
8CSS|1|A|A|1343
8CSS|1|A|U|1344
8CSS|1|A|G|1345

Current chains

Chain A

12S mitochondrial rRNA

Nearby chains

Chain 7

Methyltransferase-like protein 17, mitochondrial