IL_8CST_031
3D structure
- PDB id
- 8CST (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human mitochondrial small subunit assembly intermediate (State E)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.85 Å
Loop
- Sequence
- CCG*UCAAGG
- Length
- 9 nucleotides
- Bulged bases
- 8CST|1|A|A|1331
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CST_031 not in the Motif Atlas
- Homologous match to IL_4LFB_044
- Geometric discrepancy: 0.4443
- The information below is about IL_4LFB_044
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_82453.3
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
8CST|1|A|C|1261
8CST|1|A|C|1262
8CST|1|A|G|1263
*
8CST|1|A|U|1329
8CST|1|A|C|1330
8CST|1|A|A|1331
8CST|1|A|A|1332
8CST|1|A|G|1333
8CST|1|A|G|1334
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain K
- 28S ribosomal protein S14, mitochondrial
Coloring options: