3D structure

PDB id
8CST (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human mitochondrial small subunit assembly intermediate (State E)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.85 Å

Loop

Sequence
GACAU*ACCC
Length
9 nucleotides
Bulged bases
8CST|1|A|C|1532
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8CST|1|A|G|1516
8CST|1|A|A|1517
8CST|1|A|C|1518
8CST|1|A|A|1519
8CST|1|A|U|1520
*
8CST|1|A|A|1530
8CST|1|A|C|1531
8CST|1|A|C|1532
8CST|1|A|C|1533

Current chains

Chain A
12S mitochondrial rRNA

Nearby chains

Chain 0
28S ribosomal protein S34, mitochondrial
Chain L
28S ribosomal protein S15, mitochondrial
Chain V
28S ribosomal protein S27, mitochondrial

Coloring options:

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