IL_8CVK_148
3D structure
- PDB id
- 8CVK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.5 Å
Loop
- Sequence
- GA*UAC
- Length
- 5 nucleotides
- Bulged bases
- 8CVK|1|1a|A|1394
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CVK_148 not in the Motif Atlas
- Homologous match to IL_5J7L_039
- Geometric discrepancy: 0.0838
- The information below is about IL_5J7L_039
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 130
Unit IDs
8CVK|1|1a|G|922
8CVK|1|1a|A|923
*
8CVK|1|1a|U|1393
8CVK|1|1a|A|1394
8CVK|1|1a|C|1395
Current chains
- Chain 1a
- 16S Ribosomal RNA
Nearby chains
- Chain 1e
- 30S ribosomal protein S5
Coloring options: