IL_8CVL_282
3D structure
- PDB id
- 8CVL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.3 Å
Loop
- Sequence
- CCC*GGAAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8CVL_282 not in the Motif Atlas
- Homologous match to IL_4WF9_114
- Geometric discrepancy: 0.1377
- The information below is about IL_4WF9_114
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_10810.1
- Basepair signature
- cWW-L-cWS-cSH-cWW
- Number of instances in this motif group
- 1
Unit IDs
8CVL|1|2B|C|30
8CVL|1|2B|C|31
8CVL|1|2B|C|32
*
8CVL|1|2B|G|50
8CVL|1|2B|G|51
8CVL|1|2B|A|52
8CVL|1|2B|A|53
8CVL|1|2B|G|54
Current chains
- Chain 2B
- 5S Ribosomal RNA
Nearby chains
- Chain 2G
- 50S ribosomal protein L5
- Chain 2S
- 50S ribosomal protein L18
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