IL_8E30_050

3D structure

PDB id

8E30 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound streptogramin A analog 3142

Experimental method

ELECTRON MICROSCOPY

Resolution

1.91 Å

Loop

Sequence

UG*CAUCAG

Length

8 nucleotides

Bulged bases

8E30|1|I|U|1584

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8E30_050 not in the Motif Atlas

Homologous match to IL_5J7L_294

Geometric discrepancy: 0.2576

The information below is about IL_5J7L_294

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_87211.1

Basepair signature

cWW-cSW-L-cWW-L

Number of instances in this motif group

1

Unit IDs

8E30|1|I|U|1415
8E30|1|I|G|1416
*
8E30|1|I|C|1582
8E30|1|I|A|1583
8E30|1|I|U|1584
8E30|1|I|C|1585
8E30|1|I|A|1586
8E30|1|I|G|1587

Current chains

Chain I

23S ribosomal RNA

Nearby chains