IL_8E30_114

3D structure

PDB id

8E30 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound streptogramin A analog 3142

Experimental method

ELECTRON MICROSCOPY

Resolution

1.91 Å

Loop

Sequence

GGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAG*CUCAC

Length

42 nucleotides

Bulged bases

8E30|1|I|U|1061, 8E30|1|I|A|1070, 8E30|1|I|U|1078

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E30|1|I|G|1055
8E30|1|I|G|1056
8E30|1|I|A|1057
8E30|1|I|U|1058
8E30|1|I|G|1059
8E30|1|I|U|1060
8E30|1|I|U|1061
8E30|1|I|G|1062
8E30|1|I|G|1063
8E30|1|I|C|1064
8E30|1|I|U|1065
8E30|1|I|U|1066
8E30|1|I|A|1067
8E30|1|I|G|1068
8E30|1|I|A|1069
8E30|1|I|A|1070
8E30|1|I|G|1071
8E30|1|I|C|1072
8E30|1|I|A|1073
8E30|1|I|G|1074
8E30|1|I|C|1075
8E30|1|I|C|1076
8E30|1|I|A|1077
8E30|1|I|U|1078
8E30|1|I|C|1079
8E30|1|I|A|1080
8E30|1|I|U|1081
8E30|1|I|U|1082
8E30|1|I|U|1083
8E30|1|I|A|1084
8E30|1|I|A|1085
8E30|1|I|A|1086
8E30|1|I|G|1087
8E30|1|I|A|1088
8E30|1|I|A|1089
8E30|1|I|A|1090
8E30|1|I|G|1091
*
8E30|1|I|C|1100
8E30|1|I|U|1101
8E30|1|I|C|1102
8E30|1|I|A|1103
8E30|1|I|C|1104

Current chains

Chain I

23S ribosomal RNA

Nearby chains