IL_8E32_042

3D structure

PDB id

8E32 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

AGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAG*CUCACU

Length

44 nucleotides

Bulged bases

8E32|1|I|U|1078

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E32|1|I|A|1054
8E32|1|I|G|1055
8E32|1|I|G|1056
8E32|1|I|A|1057
8E32|1|I|U|1058
8E32|1|I|G|1059
8E32|1|I|U|1060
8E32|1|I|U|1061
8E32|1|I|G|1062
8E32|1|I|G|1063
8E32|1|I|C|1064
8E32|1|I|U|1065
8E32|1|I|U|1066
8E32|1|I|A|1067
8E32|1|I|G|1068
8E32|1|I|A|1069
8E32|1|I|A|1070
8E32|1|I|G|1071
8E32|1|I|C|1072
8E32|1|I|A|1073
8E32|1|I|G|1074
8E32|1|I|C|1075
8E32|1|I|C|1076
8E32|1|I|A|1077
8E32|1|I|U|1078
8E32|1|I|C|1079
8E32|1|I|A|1080
8E32|1|I|U|1081
8E32|1|I|U|1082
8E32|1|I|U|1083
8E32|1|I|A|1084
8E32|1|I|A|1085
8E32|1|I|A|1086
8E32|1|I|G|1087
8E32|1|I|A|1088
8E32|1|I|A|1089
8E32|1|I|A|1090
8E32|1|I|G|1091
*
8E32|1|I|C|1100
8E32|1|I|U|1101
8E32|1|I|C|1102
8E32|1|I|A|1103
8E32|1|I|C|1104
8E32|1|I|U|1105

Current chains

Chain I

23S ribosomal RNA

Nearby chains