IL_8E32_116

3D structure

PDB id

8E32 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

GGGAAGG*UCGGCCU

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E32|1|I|G|1036
8E32|1|I|G|1037
8E32|1|I|G|1038
8E32|1|I|A|1039
8E32|1|I|A|1040
8E32|1|I|G|1041
8E32|1|I|G|1042
*
8E32|1|I|U|1113
8E32|1|I|C|1114
8E32|1|I|G|1115
8E32|1|I|G|1116
8E32|1|I|C|1117
8E32|1|I|C|1118
8E32|1|I|U|1119

Current chains

Chain I

23S ribosomal RNA

Nearby chains