IL_8E33_119

3D structure

PDB id

8E33 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound streptogramin analog SAB001

Experimental method

ELECTRON MICROSCOPY

Resolution

2.23 Å

Loop

Sequence

CGAGGCA*UGCUGAAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E33|1|I|C|1526
8E33|1|I|G|1527
8E33|1|I|A|1528
8E33|1|I|G|1529
8E33|1|I|G|1530
8E33|1|I|C|1531
8E33|1|I|A|1532
*
8E33|1|I|U|1539
8E33|1|I|G|1540
8E33|1|I|C|1541
8E33|1|I|U|1542
8E33|1|I|G|1543
8E33|1|I|A|1544
8E33|1|I|A|1545
8E33|1|I|G|1546

Current chains

Chain I

23S ribosomal RNA

Nearby chains