3D structure

PDB id
8E35 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 50S ribosome bound to compound SAB002
Experimental method
ELECTRON MICROSCOPY
Resolution
2.27 Å

Loop

Sequence
GUGUAGG*CUGAGGC
Length
14 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8E35|1|I|G|1473
8E35|1|I|U|1474
8E35|1|I|G|1475
8E35|1|I|U|1476
8E35|1|I|A|1477
8E35|1|I|G|1478
8E35|1|I|G|1479
*
8E35|1|I|C|1512
8E35|1|I|U|1513
8E35|1|I|G|1514
8E35|1|I|A|1515
8E35|1|I|G|1516
8E35|1|I|G|1517
8E35|1|I|C|1518

Current chains

Chain I
23S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0848 s