IL_8E35_088

3D structure

PDB id

8E35 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound SAB002

Experimental method

ELECTRON MICROSCOPY

Resolution

2.27 Å

Loop

Sequence

CUUUGAAGUGUGGACGCCAGUCUGC*GGAG

Length

29 nucleotides

Bulged bases

8E35|1|I|U|2131, 8E35|1|I|U|2132, 8E35|1|I|A|2135, 8E35|1|I|C|2145

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E35|1|I|C|2129
8E35|1|I|U|2130
8E35|1|I|U|2131
8E35|1|I|U|2132
8E35|1|I|G|2133
8E35|1|I|A|2134
8E35|1|I|A|2135
8E35|1|I|G|2136
8E35|1|I|U|2137
8E35|1|I|G|2138
8E35|1|I|U|2139
8E35|1|I|G|2140
8E35|1|I|G|2141
8E35|1|I|A|2142
8E35|1|I|C|2143
8E35|1|I|G|2144
8E35|1|I|C|2145
8E35|1|I|C|2146
8E35|1|I|A|2147
8E35|1|I|G|2148
8E35|1|I|U|2149
8E35|1|I|C|2150
8E35|1|I|U|2151
8E35|1|I|G|2152
8E35|1|I|C|2153
*
8E35|1|I|G|2156
8E35|1|I|G|2157
8E35|1|I|A|2158
8E35|1|I|G|2159

Current chains

Chain I

23S ribosomal RNA

Nearby chains