IL_8E35_125
3D structure
- PDB id
- 8E35 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 50S ribosome bound to compound SAB002
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.27 Å
Loop
- Sequence
- GGAACUAGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8E35_125 not in the Motif Atlas
- Homologous match to IL_4WF9_117
- Geometric discrepancy: 0.0981
- The information below is about IL_4WF9_117
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22854.4
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 7
Unit IDs
8E35|1|I|G|1666
8E35|1|I|G|1667
8E35|1|I|A|1668
8E35|1|I|A|1669
8E35|1|I|C|1670
8E35|1|I|U|1671
8E35|1|I|A|1672
8E35|1|I|G|1673
8E35|1|I|G|1674
*
8E35|1|I|C|1990
8E35|1|I|U|1991
8E35|1|I|G|1992
8E35|1|I|U|1993
8E35|1|I|C|1994
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain N
- 50S ribosomal protein L3
Coloring options: