IL_8E35_138

3D structure

PDB id

8E35 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound SAB002

Experimental method

ELECTRON MICROSCOPY

Resolution

2.27 Å

Loop

Sequence

AGGAUGUUGG*CCAUCAUUUAAAGAAAGCGUAAUAGCUCACU

Length

41 nucleotides

Bulged bases

8E35|1|I|U|1061, 8E35|1|I|U|1078

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E35|1|I|A|1054
8E35|1|I|G|1055
8E35|1|I|G|1056
8E35|1|I|A|1057
8E35|1|I|U|1058
8E35|1|I|G|1059
8E35|1|I|U|1060
8E35|1|I|U|1061
8E35|1|I|G|1062
8E35|1|I|G|1063
*
8E35|1|I|C|1075
8E35|1|I|C|1076
8E35|1|I|A|1077
8E35|1|I|U|1078
8E35|1|I|C|1079
8E35|1|I|A|1080
8E35|1|I|U|1081
8E35|1|I|U|1082
8E35|1|I|U|1083
8E35|1|I|A|1084
8E35|1|I|A|1085
8E35|1|I|A|1086
8E35|1|I|G|1087
8E35|1|I|A|1088
8E35|1|I|A|1089
8E35|1|I|A|1090
8E35|1|I|G|1091
8E35|1|I|C|1092
8E35|1|I|G|1093
8E35|1|I|U|1094
8E35|1|I|A|1095
8E35|1|I|A|1096
8E35|1|I|U|1097
8E35|1|I|A|1098
8E35|1|I|G|1099
8E35|1|I|C|1100
8E35|1|I|U|1101
8E35|1|I|C|1102
8E35|1|I|A|1103
8E35|1|I|C|1104
8E35|1|I|U|1105

Current chains

Chain I

23S ribosomal RNA

Nearby chains