IL_8E36_116

3D structure

PDB id

8E36 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to compound streptogramin A analog 3146

Experimental method

ELECTRON MICROSCOPY

Resolution

2.38 Å

Loop

Sequence

GGAUGUUGG*CCAUCAUUUAAAGAAAGCGUAAUAGCUCAC

Length

39 nucleotides

Bulged bases

8E36|1|I|U|1061, 8E36|1|I|U|1078, 8E36|1|I|A|1095, 8E36|1|I|A|1096

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E36|1|I|G|1055
8E36|1|I|G|1056
8E36|1|I|A|1057
8E36|1|I|U|1058
8E36|1|I|G|1059
8E36|1|I|U|1060
8E36|1|I|U|1061
8E36|1|I|G|1062
8E36|1|I|G|1063
*
8E36|1|I|C|1075
8E36|1|I|C|1076
8E36|1|I|A|1077
8E36|1|I|U|1078
8E36|1|I|C|1079
8E36|1|I|A|1080
8E36|1|I|U|1081
8E36|1|I|U|1082
8E36|1|I|U|1083
8E36|1|I|A|1084
8E36|1|I|A|1085
8E36|1|I|A|1086
8E36|1|I|G|1087
8E36|1|I|A|1088
8E36|1|I|A|1089
8E36|1|I|A|1090
8E36|1|I|G|1091
8E36|1|I|C|1092
8E36|1|I|G|1093
8E36|1|I|U|1094
8E36|1|I|A|1095
8E36|1|I|A|1096
8E36|1|I|U|1097
8E36|1|I|A|1098
8E36|1|I|G|1099
8E36|1|I|C|1100
8E36|1|I|U|1101
8E36|1|I|C|1102
8E36|1|I|A|1103
8E36|1|I|C|1104

Current chains

Chain I

23S ribosomal RNA

Nearby chains