IL_8E3L_022
3D structure
- PDB id
- 8E3L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 50S ribosome bound to D-linker solithromycin conjugate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 8E3L|1|I|G|776, 8E3L|1|I|A|788, 8E3L|1|I|A|789, 8E3L|1|I|U|790
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8E3L_022 not in the Motif Atlas
- Geometric match to IL_4V9F_030
- Geometric discrepancy: 0.1356
- The information below is about IL_4V9F_030
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_57881.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
8E3L|1|I|G|775
8E3L|1|I|G|776
8E3L|1|I|G|777
*
8E3L|1|I|C|787
8E3L|1|I|A|788
8E3L|1|I|A|789
8E3L|1|I|U|790
8E3L|1|I|C|791
Current chains
- Chain I
- 50S ribosomal RNA
Nearby chains
- Chain K
- 50S ribosomal protein L2
- Chain M
- 50S ribosomal protein L4
- Chain P
- 50S ribosomal protein L22
- Chain R
- 50S ribosomal protein L34
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