IL_8E3L_041

3D structure

PDB id

8E3L (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to D-linker solithromycin conjugate

Experimental method

ELECTRON MICROSCOPY

Resolution

2.35 Å

Loop

Sequence

AGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAA*UCACU

Length

42 nucleotides

Bulged bases

8E3L|1|I|U|1078

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E3L|1|I|A|1054
8E3L|1|I|G|1055
8E3L|1|I|G|1056
8E3L|1|I|A|1057
8E3L|1|I|U|1058
8E3L|1|I|G|1059
8E3L|1|I|U|1060
8E3L|1|I|U|1061
8E3L|1|I|G|1062
8E3L|1|I|G|1063
8E3L|1|I|C|1064
8E3L|1|I|U|1065
8E3L|1|I|U|1066
8E3L|1|I|A|1067
8E3L|1|I|G|1068
8E3L|1|I|A|1069
8E3L|1|I|A|1070
8E3L|1|I|G|1071
8E3L|1|I|C|1072
8E3L|1|I|A|1073
8E3L|1|I|G|1074
8E3L|1|I|C|1075
8E3L|1|I|C|1076
8E3L|1|I|A|1077
8E3L|1|I|U|1078
8E3L|1|I|C|1079
8E3L|1|I|A|1080
8E3L|1|I|U|1081
8E3L|1|I|U|1082
8E3L|1|I|U|1083
8E3L|1|I|A|1084
8E3L|1|I|A|1085
8E3L|1|I|A|1086
8E3L|1|I|G|1087
8E3L|1|I|A|1088
8E3L|1|I|A|1089
8E3L|1|I|A|1090
*
8E3L|1|I|U|1101
8E3L|1|I|C|1102
8E3L|1|I|A|1103
8E3L|1|I|C|1104
8E3L|1|I|U|1105

Current chains

Chain I

50S ribosomal RNA

Nearby chains