IL_8E3O_086

3D structure

PDB id

8E3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to solithromycin and VM1

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

CCUUGAUGUGUAGGAUAGG*CCCUUUAAUG

Length

29 nucleotides

Bulged bases

8E3O|1|I|C|2104, 8E3O|1|I|G|2116, 8E3O|1|I|U|2118

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E3O|1|I|C|2103
8E3O|1|I|C|2104
8E3O|1|I|U|2105
8E3O|1|I|U|2106
8E3O|1|I|G|2107
8E3O|1|I|A|2108
8E3O|1|I|U|2109
8E3O|1|I|G|2110
8E3O|1|I|U|2111
8E3O|1|I|G|2112
8E3O|1|I|U|2113
8E3O|1|I|A|2114
8E3O|1|I|G|2115
8E3O|1|I|G|2116
8E3O|1|I|A|2117
8E3O|1|I|U|2118
8E3O|1|I|A|2119
8E3O|1|I|G|2120
8E3O|1|I|G|2121
*
8E3O|1|I|C|2177
8E3O|1|I|C|2178
8E3O|1|I|C|2179
8E3O|1|I|U|2180
8E3O|1|I|U|2181
8E3O|1|I|U|2182
8E3O|1|I|A|2183
8E3O|1|I|A|2184
8E3O|1|I|U|2185
8E3O|1|I|G|2186

Current chains

Chain I

23S ribosomal RNA

Nearby chains