IL_8E3O_116

3D structure

PDB id

8E3O (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to solithromycin and VM1

Experimental method

ELECTRON MICROSCOPY

Resolution

1.99 Å

Loop

Sequence

GAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAG*CUCAC

Length

41 nucleotides

Bulged bases

8E3O|1|I|U|1061, 8E3O|1|I|A|1070, 8E3O|1|I|U|1078

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E3O|1|I|G|1056
8E3O|1|I|A|1057
8E3O|1|I|U|1058
8E3O|1|I|G|1059
8E3O|1|I|U|1060
8E3O|1|I|U|1061
8E3O|1|I|G|1062
8E3O|1|I|G|1063
8E3O|1|I|C|1064
8E3O|1|I|U|1065
8E3O|1|I|U|1066
8E3O|1|I|A|1067
8E3O|1|I|G|1068
8E3O|1|I|A|1069
8E3O|1|I|A|1070
8E3O|1|I|G|1071
8E3O|1|I|C|1072
8E3O|1|I|A|1073
8E3O|1|I|G|1074
8E3O|1|I|C|1075
8E3O|1|I|C|1076
8E3O|1|I|A|1077
8E3O|1|I|U|1078
8E3O|1|I|C|1079
8E3O|1|I|A|1080
8E3O|1|I|U|1081
8E3O|1|I|U|1082
8E3O|1|I|U|1083
8E3O|1|I|A|1084
8E3O|1|I|A|1085
8E3O|1|I|A|1086
8E3O|1|I|G|1087
8E3O|1|I|A|1088
8E3O|1|I|A|1089
8E3O|1|I|A|1090
8E3O|1|I|G|1091
*
8E3O|1|I|C|1100
8E3O|1|I|U|1101
8E3O|1|I|C|1102
8E3O|1|I|A|1103
8E3O|1|I|C|1104

Current chains

Chain I

23S ribosomal RNA

Nearby chains