IL_8E45_087

3D structure

PDB id

8E45 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to antibiotic analog SLC17

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

AGCCUUGAUGUGUAGGAUAGG*CCCUUUAAUGUU

Length

33 nucleotides

Bulged bases

8E45|1|I|C|2104, 8E45|1|I|G|2116, 8E45|1|I|U|2118

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E45|1|I|A|2101
8E45|1|I|G|2102
8E45|1|I|C|2103
8E45|1|I|C|2104
8E45|1|I|U|2105
8E45|1|I|U|2106
8E45|1|I|G|2107
8E45|1|I|A|2108
8E45|1|I|U|2109
8E45|1|I|G|2110
8E45|1|I|U|2111
8E45|1|I|G|2112
8E45|1|I|U|2113
8E45|1|I|A|2114
8E45|1|I|G|2115
8E45|1|I|G|2116
8E45|1|I|A|2117
8E45|1|I|U|2118
8E45|1|I|A|2119
8E45|1|I|G|2120
8E45|1|I|G|2121
*
8E45|1|I|C|2177
8E45|1|I|C|2178
8E45|1|I|C|2179
8E45|1|I|U|2180
8E45|1|I|U|2181
8E45|1|I|U|2182
8E45|1|I|A|2183
8E45|1|I|A|2184
8E45|1|I|U|2185
8E45|1|I|G|2186
8E45|1|I|U|2187
8E45|1|I|U|2188

Current chains

Chain I

23S ribosomal RNA

Nearby chains