IL_8E45_111

3D structure

PDB id

8E45 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to antibiotic analog SLC17

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

CCUGGC*GCCAGG

Length

12 nucleotides

Bulged bases

None detected

QA status

Self-complementary: CCUGGC,GCCAGG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E45|1|J|C|3
8E45|1|J|C|4
8E45|1|J|U|5
8E45|1|J|G|6
8E45|1|J|G|7
8E45|1|J|C|8
*
8E45|1|J|G|112
8E45|1|J|C|113
8E45|1|J|C|114
8E45|1|J|A|115
8E45|1|J|G|116
8E45|1|J|G|117

Current chains

Chain J

5S ribosomal RNA

Nearby chains