IL_8E46_009

3D structure

PDB id

8E46 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to antibiotic analog SLC21

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

CCUGAAUCA*UGUGAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E46|1|I|C|274
8E46|1|I|C|275
8E46|1|I|U|276
8E46|1|I|G|277
8E46|1|I|A|278
8E46|1|I|A|279
8E46|1|I|U|280
8E46|1|I|C|281
8E46|1|I|A|282
*
8E46|1|I|U|358
8E46|1|I|G|359
8E46|1|I|U|360
8E46|1|I|G|361
8E46|1|I|A|362
8E46|1|I|G|363

Current chains

Chain I

23S ribosomal RNA

Nearby chains