IL_8E46_064
3D structure
- PDB id
- 8E46 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 50S ribosome bound to antibiotic analog SLC21
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.32 Å
Loop
- Sequence
- ACUAGG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 8E46|1|I|G|1992
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8E46_064 not in the Motif Atlas
- Homologous match to IL_4WF9_065
- Geometric discrepancy: 0.0889
- The information below is about IL_4WF9_065
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_28217.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
8E46|1|I|A|1669
8E46|1|I|C|1670
8E46|1|I|U|1671
8E46|1|I|A|1672
8E46|1|I|G|1673
8E46|1|I|G|1674
*
8E46|1|I|C|1990
8E46|1|I|U|1991
8E46|1|I|G|1992
8E46|1|I|U|1993
Current chains
- Chain I
- 23S ribosomal RNA
Nearby chains
- Chain N
- 50S ribosomal protein L3
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