IL_8E46_119

3D structure

PDB id

8E46 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to antibiotic analog SLC21

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

CCCAGACAGCC*GGUCGAG

Length

18 nucleotides

Bulged bases

8E46|1|I|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E46|1|I|C|1043
8E46|1|I|C|1044
8E46|1|I|C|1045
8E46|1|I|A|1046
8E46|1|I|G|1047
8E46|1|I|A|1048
8E46|1|I|C|1049
8E46|1|I|A|1050
8E46|1|I|G|1051
8E46|1|I|C|1052
8E46|1|I|C|1053
*
8E46|1|I|G|1106
8E46|1|I|G|1107
8E46|1|I|U|1108
8E46|1|I|C|1109
8E46|1|I|G|1110
8E46|1|I|A|1111
8E46|1|I|G|1112

Current chains

Chain I

23S ribosomal RNA

Nearby chains