IL_8E46_127

3D structure

PDB id

8E46 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to antibiotic analog SLC21

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

UGAGCCUUGAUGUGUAGGAUAGG*CCCUUUAAUGUUUG

Length

37 nucleotides

Bulged bases

8E46|1|I|C|2104, 8E46|1|I|U|2111, 8E46|1|I|G|2116, 8E46|1|I|U|2118

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E46|1|I|U|2099
8E46|1|I|G|2100
8E46|1|I|A|2101
8E46|1|I|G|2102
8E46|1|I|C|2103
8E46|1|I|C|2104
8E46|1|I|U|2105
8E46|1|I|U|2106
8E46|1|I|G|2107
8E46|1|I|A|2108
8E46|1|I|U|2109
8E46|1|I|G|2110
8E46|1|I|U|2111
8E46|1|I|G|2112
8E46|1|I|U|2113
8E46|1|I|A|2114
8E46|1|I|G|2115
8E46|1|I|G|2116
8E46|1|I|A|2117
8E46|1|I|U|2118
8E46|1|I|A|2119
8E46|1|I|G|2120
8E46|1|I|G|2121
*
8E46|1|I|C|2177
8E46|1|I|C|2178
8E46|1|I|C|2179
8E46|1|I|U|2180
8E46|1|I|U|2181
8E46|1|I|U|2182
8E46|1|I|A|2183
8E46|1|I|A|2184
8E46|1|I|U|2185
8E46|1|I|G|2186
8E46|1|I|U|2187
8E46|1|I|U|2188
8E46|1|I|U|2189
8E46|1|I|G|2190

Current chains

Chain I

23S ribosomal RNA

Nearby chains