IL_8E47_086

3D structure

PDB id

8E47 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to antibiotic analog SLC26

Experimental method

ELECTRON MICROSCOPY

Resolution

2.32 Å

Loop

Sequence

AGCCUUG*UAAUGUU

Length

14 nucleotides

Bulged bases

8E47|1|I|C|2104

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8E47|1|I|A|2101
8E47|1|I|G|2102
8E47|1|I|C|2103
8E47|1|I|C|2104
8E47|1|I|U|2105
8E47|1|I|U|2106
8E47|1|I|G|2107
*
8E47|1|I|U|2182
8E47|1|I|A|2183
8E47|1|I|A|2184
8E47|1|I|U|2185
8E47|1|I|G|2186
8E47|1|I|U|2187
8E47|1|I|U|2188

Current chains

Chain I

23S ribosomal RNA

Nearby chains