IL_8EIU_151
3D structure
- PDB id
- 8EIU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with A-loop mutations U2554C and U2555C
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.24 Å
Loop
- Sequence
- AUA*UGUUU
- Length
- 8 nucleotides
- Bulged bases
- 8EIU|1|a|U|2491
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8EIU_151 not in the Motif Atlas
- Geometric match to IL_5J7L_337
- Geometric discrepancy: 0.1068
- The information below is about IL_5J7L_337
- Detailed Annotation
- Major groove minor groove platform with extra cWW
- Broad Annotation
- Major groove minor groove platform with extra cWW
- Motif group
- IL_51387.3
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 21
Unit IDs
8EIU|1|a|A|2459
8EIU|1|a|U|2460
8EIU|1|a|A|2461
*
8EIU|1|a|U|2489
8EIU|1|a|G|2490
8EIU|1|a|U|2491
8EIU|1|a|U|2492
8EIU|1|a|U|2493
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain Y
- Transfer RNA; tRNA
- Chain d
- 50S ribosomal protein L3
- Chain l
- 50S ribosomal protein L16
- Chain v
- 50S ribosomal protein L27
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