IL_8EKC_187

3D structure

PDB id

8EKC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GAUGUGUAGGAUAG*CCUUU

Length

19 nucleotides

Bulged bases

8EKC|1|A|U|2111, 8EKC|1|A|U|2118

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8EKC|1|A|G|2107
8EKC|1|A|A|2108
8EKC|1|A|U|2109
8EKC|1|A|G|2110
8EKC|1|A|U|2111
8EKC|1|A|G|2112
8EKC|1|A|U|2113
8EKC|1|A|A|2114
8EKC|1|A|G|2115
8EKC|1|A|G|2116
8EKC|1|A|A|2117
8EKC|1|A|U|2118
8EKC|1|A|A|2119
8EKC|1|A|G|2120
*
8EKC|1|A|C|2178
8EKC|1|A|C|2179
8EKC|1|A|U|2180
8EKC|1|A|U|2181
8EKC|1|A|U|2182

Current chains

Chain A

23S Ribosomal RNA

Nearby chains