IL_8EV6_042

3D structure

PDB id

8EV6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

2.946 Å

Loop

Sequence

GUGGC*GCCAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8EV6|1|1A|G|1105
8EV6|1|1A|U|1106
8EV6|1|1A|G|1108
8EV6|1|1A|G|1109
8EV6|1|1A|C|1110
*
8EV6|1|1A|G|1120
8EV6|1|1A|C|1121
8EV6|1|1A|C|1122
8EV6|1|1A|A|1123
8EV6|1|1A|U|1124
8EV6|1|1A|C|1125

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains