IL_8EV6_263

3D structure

PDB id

8EV6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

2.946 Å

Loop

Sequence

GGAGC*GCGCCGGUGAAAUAC

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8EV6|1|2A|G|2124
8EV6|1|2A|G|2125
8EV6|1|2A|A|2126
8EV6|1|2A|G|2127
8EV6|1|2A|C|2128
*
8EV6|1|2A|G|2160
8EV6|1|2A|C|2161
8EV6|1|2A|G|2162
8EV6|1|2A|C|2163
8EV6|1|2A|C|2164
8EV6|1|2A|G|2165
8EV6|1|2A|G|2166
8EV6|1|2A|U|2167
8EV6|1|2A|G|2168
8EV6|1|2A|A|2169
8EV6|1|2A|A|2170
8EV6|1|2A|A|2171
8EV6|1|2A|U|2172
8EV6|1|2A|A|2173
8EV6|1|2A|C|2174

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2y

Transfer RNA; tRNA