IL_8EV6_369

3D structure

PDB id

8EV6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAs

Experimental method

X-RAY DIFFRACTION

Resolution

2.946 Å

Loop

Sequence

GGCUAGGGG*CUACCAAACC

Length

19 nucleotides

Bulged bases

8EV6|1|2A|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8EV6|1|2A|G|874
8EV6|1|2A|G|875
8EV6|1|2A|C|876
8EV6|1|2A|U|877
8EV6|1|2A|A|878
8EV6|1|2A|G|879
8EV6|1|2A|G|880
8EV6|1|2A|G|881
8EV6|1|2A|G|882
*
8EV6|1|2A|C|894
8EV6|1|2A|U|895
8EV6|1|2A|A|896
8EV6|1|2A|C|897
8EV6|1|2A|C|898
8EV6|1|2A|A|899
8EV6|1|2A|A|900
8EV6|1|2A|A|901
8EV6|1|2A|C|902
8EV6|1|2A|C|903

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2Q

50S ribosomal protein L16

Chain 2Z

50S ribosomal protein L25

Chain 2w

Transfer RNA; tRNA