IL_8EVQ_211
3D structure
- PDB id
- 8EVQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypopseudouridylated Ribosome bound with TSV IRES, eEF2, GDP, and sordarin, Structure I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.72 Å
Loop
- Sequence
- GUG*CC
- Length
- 5 nucleotides
- Bulged bases
- 8EVQ|1|B5|U|1052
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8EVQ_211 not in the Motif Atlas
- Homologous match to IL_4V88_439
- Geometric discrepancy: 0.3868
- The information below is about IL_4V88_439
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.19
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
8EVQ|1|B5|G|1051
8EVQ|1|B5|U|1052
8EVQ|1|B5|G|1053
*
8EVQ|1|B5|C|1066
8EVQ|1|B5|C|1067
Current chains
- Chain B5
- 18S rRNA
Nearby chains
- Chain BA
- 40S ribosomal protein S0-A
- Chain BB
- RPS1A isoform 1
- Chain BR
- 40S ribosomal protein S17-A
- Chain Bb
- 40S ribosomal protein S27-A
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