IL_8EVQ_267

3D structure

PDB id

8EVQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Hypopseudouridylated Ribosome bound with TSV IRES, eEF2, GDP, and sordarin, Structure I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

GUAUU*ACUUUUC

Length

12 nucleotides

Bulged bases

8EVQ|1|B5|U|260

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8EVQ|1|B5|G|204
8EVQ|1|B5|U|205
8EVQ|1|B5|A|206
8EVQ|1|B5|U|207
8EVQ|1|B5|U|208
*
8EVQ|1|B5|A|257
8EVQ|1|B5|C|258
8EVQ|1|B5|U|259
8EVQ|1|B5|U|260
8EVQ|1|B5|U|261
8EVQ|1|B5|U|262
8EVQ|1|B5|C|263

Current chains

Chain B5

18S rRNA

Nearby chains

Chain BE

40S ribosomal protein S4-A

Chain BG

40S ribosomal protein S6-A

Chain BI

40S ribosomal protein S8-A