IL_8EVQ_286

3D structure

PDB id

8EVQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Hypopseudouridylated Ribosome bound with TSV IRES, eEF2, GDP, and sordarin, Structure I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.72 Å

Loop

Sequence

UACCAUAG*CAAAAA

Length

14 nucleotides

Bulged bases

8EVQ|1|EC|A|6860, 8EVQ|1|EC|A|6873

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8EVQ|1|EC|U|6854
8EVQ|1|EC|A|6855
8EVQ|1|EC|C|6856
8EVQ|1|EC|C|6857
8EVQ|1|EC|A|6858
8EVQ|1|EC|U|6859
8EVQ|1|EC|A|6860
8EVQ|1|EC|G|6861
*
8EVQ|1|EC|C|6869
8EVQ|1|EC|A|6870
8EVQ|1|EC|A|6871
8EVQ|1|EC|A|6872
8EVQ|1|EC|A|6873
8EVQ|1|EC|A|6874

Current chains

Chain EC

Taura syndrome virus (TSV) internal ribosome entry site (IRES) RNA

Nearby chains

Chain BF

Rps5p

Chain BZ

RPS25A isoform 1