IL_8EVR_011
3D structure
- PDB id
- 8EVR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.87 Å
Loop
- Sequence
- GGGCCGUUCC*GGAGUGCGGUU
- Length
- 21 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8EVR|1|A1|G|171
8EVR|1|A1|G|172
8EVR|1|A1|G|173
8EVR|1|A1|C|174
8EVR|1|A1|C|175
8EVR|1|A1|G|176
8EVR|1|A1|U|177
8EVR|1|A1|U|178
8EVR|1|A1|C|179
8EVR|1|A1|C|180
*
8EVR|1|A1|G|236
8EVR|1|A1|G|237
8EVR|1|A1|A|238
8EVR|1|A1|G|239
8EVR|1|A1|U|240
8EVR|1|A1|G|241
8EVR|1|A1|C|242
8EVR|1|A1|G|243
8EVR|1|A1|G|244
8EVR|1|A1|U|245
8EVR|1|A1|U|246
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain A4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AL
- 60S ribosomal protein L13-A
- Chain Ah
- 60S ribosomal protein L35-A
- Chain Aj
- 60S ribosomal protein L37-A
Coloring options: