IL_8EVR_066
3D structure
- PDB id
- 8EVR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.87 Å
Loop
- Sequence
- CCUGAU*AUGCAGG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8EVR|1|A1|C|1562
8EVR|1|A1|C|1563
8EVR|1|A1|U|1564
8EVR|1|A1|G|1565
8EVR|1|A1|A|1566
8EVR|1|A1|U|1567
*
8EVR|1|A1|A|1571
8EVR|1|A1|U|1572
8EVR|1|A1|G|1573
8EVR|1|A1|C|1574
8EVR|1|A1|A|1575
8EVR|1|A1|G|1576
8EVR|1|A1|G|1577
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain A4
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain AG
- 60S ribosomal protein L8-A
- Chain AX
- 60S ribosomal protein L25
Coloring options: