IL_8EVR_103
3D structure
- PDB id
- 8EVR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.87 Å
Loop
- Sequence
- GUGUAGAAUAAG*CUAC
- Length
- 16 nucleotides
- Bulged bases
- 8EVR|1|A1|A|2458, 8EVR|1|A1|U|2460
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8EVR|1|A1|G|2452
8EVR|1|A1|U|2453
8EVR|1|A1|G|2454
8EVR|1|A1|U|2455
8EVR|1|A1|A|2456
8EVR|1|A1|G|2457
8EVR|1|A1|A|2458
8EVR|1|A1|A|2459
8EVR|1|A1|U|2460
8EVR|1|A1|A|2461
8EVR|1|A1|A|2462
8EVR|1|A1|G|2463
*
8EVR|1|A1|C|2492
8EVR|1|A1|U|2493
8EVR|1|A1|A|2494
8EVR|1|A1|C|2495
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain Ai
- 60S ribosomal protein L36-A
- Chain E
- RPL1A isoform 1
- Chain EC
- TSV IRES
Coloring options: