IL_8EVS_103
3D structure
- PDB id
- 8EVS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2 and GDP, Structure II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.62 Å
Loop
- Sequence
- GGUGUAGAAUAAG*CUACC
- Length
- 18 nucleotides
- Bulged bases
- 8EVS|1|A1|U|2453, 8EVS|1|A1|U|2460
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8EVS|1|A1|G|2451
8EVS|1|A1|G|2452
8EVS|1|A1|U|2453
8EVS|1|A1|G|2454
8EVS|1|A1|U|2455
8EVS|1|A1|A|2456
8EVS|1|A1|G|2457
8EVS|1|A1|A|2458
8EVS|1|A1|A|2459
8EVS|1|A1|U|2460
8EVS|1|A1|A|2461
8EVS|1|A1|A|2462
8EVS|1|A1|G|2463
*
8EVS|1|A1|C|2492
8EVS|1|A1|U|2493
8EVS|1|A1|A|2494
8EVS|1|A1|C|2495
8EVS|1|A1|C|2496
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain E
- RPL1A isoform 1
- Chain EC
- TSV IRES
Coloring options: