IL_8EYQ_058

3D structure

PDB id

8EYQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S_delta_ksgA_h44_inactive_conformation

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GGAG*UGAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8EYQ_058 not in the Motif Atlas

Homologous match to IL_4LFB_060

Geometric discrepancy: 0.5902

The information below is about IL_4LFB_060

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.15

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

34

Unit IDs

8EYQ|1|A|G|1416
8EYQ|1|A|G|1417
8EYQ|1|A|A|1418
8EYQ|1|A|G|1419
*
8EYQ|1|A|U|1481
8EYQ|1|A|G|1482
8EYQ|1|A|A|1483
8EYQ|1|A|C|1484

Current chains

Chain A

16S_rRNA

Nearby chains