IL_8EYT_047

3D structure

PDB id

8EYT (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S_delta_ksgA+KsgA complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

UGCAU*AUG

Length

8 nucleotides

Bulged bases

8EYT|1|A|C|1054

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8EYT_047 not in the Motif Atlas

Homologous match to IL_4LFB_044

Geometric discrepancy: 0.1495

The information below is about IL_4LFB_044

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_76319.5

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

3

Unit IDs

8EYT|1|A|U|1052
8EYT|1|A|G|1053
8EYT|1|A|C|1054
8EYT|1|A|A|1055
8EYT|1|A|U|1056
*
8EYT|1|A|A|1204
8EYT|1|A|U|1205
8EYT|1|A|G|1206

Current chains

Chain A

16S rRNA

Nearby chains

Chain F

30S ribosomal protein S3

Chain J

30S ribosomal protein S10

Chain N

30S ribosomal protein S14