IL_8EYT_063

3D structure

PDB id

8EYT (explore in PDB, NAKB, or RNA 3D Hub)

Description

30S_delta_ksgA+KsgA complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CAGCGG*CCGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8EYT_063 not in the Motif Atlas

Homologous match to IL_6CZR_159

Geometric discrepancy: 0.311

The information below is about IL_6CZR_159

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8EYT|1|A|C|1129
8EYT|1|A|A|1130
8EYT|1|A|G|1131
8EYT|1|A|C|1132
8EYT|1|A|G|1133
8EYT|1|A|G|1134
*
8EYT|1|A|C|1140
8EYT|1|A|C|1141
8EYT|1|A|G|1142
8EYT|1|A|G|1143

Current chains

Chain A

16S rRNA

Nearby chains

Chain I

30S ribosomal protein S9