3D structure

PDB id
8FC3 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the Thermus thermophilus 70S ribosome in complex with protein Y, hygromycin A, and telithromycin at 2.60A resolution
Experimental method
X-RAY DIFFRACTION
Resolution
2.6 Å

Loop

Sequence
GUUGG*CCAUC
Length
10 nucleotides
Bulged bases
8FC3|1|1A|U|1061, 8FC3|1|1A|C|1076
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_8FC3_044 not in the Motif Atlas
Homologous match to IL_7RQB_043
Geometric discrepancy: 0.252
The information below is about IL_7RQB_043
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8FC3|1|1A|G|1059
8FC3|1|1A|U|1060
8FC3|1|1A|U|1061
8FC3|1|1A|G|1062
8FC3|1|1A|G|1063
*
8FC3|1|1A|C|1075
8FC3|1|1A|C|1076
8FC3|1|1A|A|1077
8FC3|1|1A|U|1078
8FC3|1|1A|C|1079

Current chains

Chain 1A
23S Ribosomal RNA

Nearby chains

Chain 1Q
50S ribosomal protein L16
Chain 1Z
50S ribosomal protein L25

Coloring options:


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